Schaalia cardiffensis F0333

Gram-positiveNon-motileanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Schaalia

Description

Schaalia cardiffensis F0333 is a Gram-positive, anaerobic bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy while utilizing them for carbon as well. This organism possesses flagella, which are typically associated with mobility; however, it is noted that Schaalia cardiffensis F0333 does not exhibit mobility. The presence of a single replicon suggests a streamlined genomic structure, which can be advantageous for efficient replication and stability in its anaerobic environment. The accession number for this strain is AQHZ00000000.1, providing a reference for genetic and genomic studies. Understanding the traits of Schaalia cardiffensis F0333 can contribute to insights into its ecological role. As an anaerobic, chemoheterotrophic organism, it may play a significant role in nutrient cycling within its environment, particularly in anaerobic ecosystems where the breakdown of organic matter is crucial. This bacterium could be involved in processes such as fermentation or the degradation of complex organic substances, which are important for maintaining the balance of microbial communities in various habitats. Overall, the traits of Schaalia cardiffensis F0333 highlight its potential ecological significance in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusSchaalia
SpeciesSchaalia cardiffensis
StrainF0333

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Schaalia cardiffensis F0333 contig00042, whole genome shotgun

Gene Summary

Adenine Count

421242 bp

Thymine Count

421742 bp

Guanine Count

669622 bp

Cytosine Count

676294 bp

Genome Length

2188900 bp

Protein-coding Genes

1983 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive142 - 1681Not Available
tyrosine--trna ligaseHMPREF9004_0001Not AvailableNegative502 - 177346522.6
23s ribosomal rnaNot AvailableNot AvailablePositive2022 - 5161Not Available
argininosuccinate lyaseHMPREF9004_0002Not AvailableNegative1848 - 328451229.9
hypothetical proteinHMPREF9004_0003Not AvailableNegative3327 - 472750692.9
5s ribosomal rnaNot AvailableNot AvailablePositive5306 - 5422Not Available
argininosuccinate synthaseHMPREF9004_0004Not AvailableNegative5078 - 630144836.0
arginine repressorHMPREF9004_0005Not AvailableNegative6346 - 686118561.3
acetylornithine transaminaseHMPREF9004_0006Not AvailableNegative6858 - 816545783.1
arginine biosynthesis argjHMPREF9004_0007Not AvailableNegative8162 - 929538954.8

Displaying genes 1 – 10 of 2036 in total

Metabolites

1792 records
Metabolite IDMetabolite nameStructureCAS number
BASm00173692-Octaprenyl-6-hydroxyphenolC48H74Chemical structure of 2-Octaprenyl-6-hydroxyphenolNULL
Average651.12Da
Monoisotopic650.579052383Da
BASm00173702-Octaprenyl-6-methoxyphenolC47H72O2Chemical structure of 2-Octaprenyl-6-methoxyphenolNULL
Average669.0734Da
Monoisotopic668.553231548Da
BASm00173712-Phospho-D-glyceric acidC3H7O7PChemical structure of 2-Phospho-D-glyceric acidNULL
Average186.0572Da
Monoisotopic185.99293909Da
BASm00173723-PhosphoglycerateC3H7O7PNot available820-11-1
Average186.056Da
Monoisotopic185.992939563Da
BASm0017373Phosphoribosyl-AMPC15H23N5O14P2Chemical structure of Phosphoribosyl-AMPNULL
Average559.3157Da
Monoisotopic559.071673493Da
BASm0017375PyrophosphateO7P2Chemical structure of Pyrophosphate14000-31-8
Average173.9433Da
Monoisotopic173.911925378Da
BASm0017378UDP-N-Acetylmuramoyl-L-alanyl-D-glutamateC22H32Cl2N2O4Chemical structure of UDP-N-Acetylmuramoyl-L-alanyl-D-glutamate17088-64-1
Average459.41Da
Monoisotopic458.1739129Da
BASm0017382Deoxythymidine diphosphate-L-rhamnoseC16H26N2O15P2Chemical structure of Deoxythymidine diphosphate-L-rhamnose2147-59-3
Average548.3296Da
Monoisotopic548.080841196Da
BASm0017385ADP-GlucoseC16H25N5O15P2Chemical structure of ADP-Glucose2140-58-1
Average589.3417Da
Monoisotopic589.082238179Da
BASm00173862-Oxo-3-hydroxy-4-phosphobutanoic acidC4H7O8PChemical structure of 2-Oxo-3-hydroxy-4-phosphobutanoic acidNULL
Average214.0673Da
Monoisotopic213.987853712Da

Displaying 161–170 of 1792 metabolites

Health Effects

No health effects information available for this bacterium.