Schaalia cardiffensis F0333

Gram-positiveNon-motileanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Schaalia

Description

Schaalia cardiffensis F0333 is a Gram-positive, anaerobic bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy while utilizing them for carbon as well. This organism possesses flagella, which are typically associated with mobility; however, it is noted that Schaalia cardiffensis F0333 does not exhibit mobility. The presence of a single replicon suggests a streamlined genomic structure, which can be advantageous for efficient replication and stability in its anaerobic environment. The accession number for this strain is AQHZ00000000.1, providing a reference for genetic and genomic studies. Understanding the traits of Schaalia cardiffensis F0333 can contribute to insights into its ecological role. As an anaerobic, chemoheterotrophic organism, it may play a significant role in nutrient cycling within its environment, particularly in anaerobic ecosystems where the breakdown of organic matter is crucial. This bacterium could be involved in processes such as fermentation or the degradation of complex organic substances, which are important for maintaining the balance of microbial communities in various habitats. Overall, the traits of Schaalia cardiffensis F0333 highlight its potential ecological significance in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusSchaalia
SpeciesSchaalia cardiffensis
StrainF0333

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Schaalia cardiffensis F0333 contig00042, whole genome shotgun

Gene Summary

Adenine Count

421242 bp

Thymine Count

421742 bp

Guanine Count

669622 bp

Cytosine Count

676294 bp

Genome Length

2188900 bp

Protein-coding Genes

1983 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive142 - 1681Not Available
tyrosine--trna ligaseHMPREF9004_0001Not AvailableNegative502 - 177346522.6
23s ribosomal rnaNot AvailableNot AvailablePositive2022 - 5161Not Available
argininosuccinate lyaseHMPREF9004_0002Not AvailableNegative1848 - 328451229.9
hypothetical proteinHMPREF9004_0003Not AvailableNegative3327 - 472750692.9
5s ribosomal rnaNot AvailableNot AvailablePositive5306 - 5422Not Available
argininosuccinate synthaseHMPREF9004_0004Not AvailableNegative5078 - 630144836.0
arginine repressorHMPREF9004_0005Not AvailableNegative6346 - 686118561.3
acetylornithine transaminaseHMPREF9004_0006Not AvailableNegative6858 - 816545783.1
arginine biosynthesis argjHMPREF9004_0007Not AvailableNegative8162 - 929538954.8

Displaying genes 1 – 10 of 2036 in total

Metabolites

1792 records
Metabolite IDMetabolite nameStructureCAS number
BASm0019742CDP-DG(19:iso/10:0)C41H75N3O15P2Chemical structure of CDP-DG(19:iso/10:0)NULL
Average912.005Da
Monoisotopic911.467342723Da
BASm0019743CDP-DG(19:iso/12:0(3-OH))C43H79N3O16P2Chemical structure of CDP-DG(19:iso/12:0(3-OH))NULL
Average956.058Da
Monoisotopic955.493557472Da
BASm0019744CDP-DG(19:iso/12:0)C43H79N3O15P2Chemical structure of CDP-DG(19:iso/12:0)NULL
Average940.059Da
Monoisotopic939.498642852Da
BASm0019745CDP-DG(19:iso/14:0(3-OH))C45H83N3O16P2Chemical structure of CDP-DG(19:iso/14:0(3-OH))NULL
Average984.112Da
Monoisotopic983.524857601Da
BASm0019746CDP-DG(19:iso/14:0)C45H83N3O15P2Chemical structure of CDP-DG(19:iso/14:0)NULL
Average968.113Da
Monoisotopic967.529942981Da
BASm0019747CDP-DG(19:iso/17:0cycw7c)C48H87N3O15P2Chemical structure of CDP-DG(19:iso/17:0cycw7c)NULL
Average1008.178Da
Monoisotopic1007.561243109Da
BASm0019749CDP-DG(19:iso/19:iso)C50H93N3O15P2Chemical structure of CDP-DG(19:iso/19:iso)NULL
Average1038.248Da
Monoisotopic1037.608193303Da
BASm0019848CL(10:0(3-OH)/10:0/10:0(3-OH)/10:0)C49H94O19P2Chemical structure of CL(10:0(3-OH)/10:0/10:0(3-OH)/10:0)NULL
Average1049.22Da
Monoisotopic1048.586454803Da
BASm0019849CL(10:0(3-OH)/12:0(3-OH)/10:0(3-OH)/12:0(3-OH))C53H102O21P2Chemical structure of CL(10:0(3-OH)/12:0(3-OH)/10:0(3-OH)/12:0(3-OH))NULL
Average1137.326Da
Monoisotopic1136.6388843Da
BASm0019850CL(10:0(3-OH)/12:0/10:0(3-OH)/12:0)C53H102O19P2Chemical structure of CL(10:0(3-OH)/12:0/10:0(3-OH)/12:0)NULL
Average1105.328Da
Monoisotopic1104.64905506Da

Displaying 1521–1530 of 1792 metabolites

Health Effects

No health effects information available for this bacterium.