Schaalia cardiffensis F0333

Gram-positiveNon-motileanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Schaalia

Description

Schaalia cardiffensis F0333 is a Gram-positive, anaerobic bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy while utilizing them for carbon as well. This organism possesses flagella, which are typically associated with mobility; however, it is noted that Schaalia cardiffensis F0333 does not exhibit mobility. The presence of a single replicon suggests a streamlined genomic structure, which can be advantageous for efficient replication and stability in its anaerobic environment. The accession number for this strain is AQHZ00000000.1, providing a reference for genetic and genomic studies. Understanding the traits of Schaalia cardiffensis F0333 can contribute to insights into its ecological role. As an anaerobic, chemoheterotrophic organism, it may play a significant role in nutrient cycling within its environment, particularly in anaerobic ecosystems where the breakdown of organic matter is crucial. This bacterium could be involved in processes such as fermentation or the degradation of complex organic substances, which are important for maintaining the balance of microbial communities in various habitats. Overall, the traits of Schaalia cardiffensis F0333 highlight its potential ecological significance in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusSchaalia
SpeciesSchaalia cardiffensis
StrainF0333

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Schaalia cardiffensis F0333 contig00042, whole genome shotgun

Gene Summary

Adenine Count

421242 bp

Thymine Count

421742 bp

Guanine Count

669622 bp

Cytosine Count

676294 bp

Genome Length

2188900 bp

Protein-coding Genes

1983 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive142 - 1681Not Available
tyrosine--trna ligaseHMPREF9004_0001Not AvailableNegative502 - 177346522.6
23s ribosomal rnaNot AvailableNot AvailablePositive2022 - 5161Not Available
argininosuccinate lyaseHMPREF9004_0002Not AvailableNegative1848 - 328451229.9
hypothetical proteinHMPREF9004_0003Not AvailableNegative3327 - 472750692.9
5s ribosomal rnaNot AvailableNot AvailablePositive5306 - 5422Not Available
argininosuccinate synthaseHMPREF9004_0004Not AvailableNegative5078 - 630144836.0
arginine repressorHMPREF9004_0005Not AvailableNegative6346 - 686118561.3
acetylornithine transaminaseHMPREF9004_0006Not AvailableNegative6858 - 816545783.1
arginine biosynthesis argjHMPREF9004_0007Not AvailableNegative8162 - 929538954.8

Displaying genes 1 – 10 of 2036 in total

Metabolites

1792 records
Metabolite IDMetabolite nameStructureCAS number
BASm00173183-Mercaptopyruvic acidC3H4O3SChemical structure of 3-Mercaptopyruvic acid2464-23-5
Average120.127Da
Monoisotopic119.988114684Da
BASm0017319Pyrroline hydroxycarboxylic acidC5H7NO3Not available22573-88-2
Average129.115Da
Monoisotopic129.042593089Da
BASm00173214,6-Dideoxy-4-oxo-dTDP-D-glucoseC16H24N2O15P2Chemical structure of 4,6-Dideoxy-4-oxo-dTDP-D-glucoseNULL
Average546.3137Da
Monoisotopic546.065191132Da
BASm0017323Pantetheine 4'-phosphateC11H23N2O7PSChemical structure of Pantetheine 4'-phosphate2226-71-3
Average358.348Da
Monoisotopic358.096358302Da
BASm0017324Coenzyme AC21H36N7O16P3SChemical structure of Coenzyme A85-61-0
Average767.534Da
Monoisotopic767.115208365Da
BASm0017325D-Mannose 1-phosphateC6H13O9PChemical structure of D-Mannose 1-phosphate27251-84-9
Average260.1358Da
Monoisotopic260.029718526Da
BASm0017326Undecaprenyl diphosphateC55H92O7P2Chemical structure of Undecaprenyl diphosphate23-13-2
Average927.2623Da
Monoisotopic926.631828322Da
BASm0017328AICARC9H15N4O8PChemical structure of AICAR3031-94-5
Average338.2112Da
Monoisotopic338.062749988Da
BASm0017329GlycineamideribotideC7H15N2O8PChemical structure of Glycineamideribotide10074-18-7
Average286.1764Da
Monoisotopic286.056601978Da
BASm0017330Tetrahydrofolic acidC19H23N7O6Chemical structure of Tetrahydrofolic acid135-16-0
Average445.4292Da
Monoisotopic445.170981503Da

Displaying 141–150 of 1792 metabolites

Health Effects

No health effects information available for this bacterium.