Schaalia cardiffensis F0333

Gram-positiveNon-motileanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Schaalia

Description

Schaalia cardiffensis F0333 is a Gram-positive, anaerobic bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy while utilizing them for carbon as well. This organism possesses flagella, which are typically associated with mobility; however, it is noted that Schaalia cardiffensis F0333 does not exhibit mobility. The presence of a single replicon suggests a streamlined genomic structure, which can be advantageous for efficient replication and stability in its anaerobic environment. The accession number for this strain is AQHZ00000000.1, providing a reference for genetic and genomic studies. Understanding the traits of Schaalia cardiffensis F0333 can contribute to insights into its ecological role. As an anaerobic, chemoheterotrophic organism, it may play a significant role in nutrient cycling within its environment, particularly in anaerobic ecosystems where the breakdown of organic matter is crucial. This bacterium could be involved in processes such as fermentation or the degradation of complex organic substances, which are important for maintaining the balance of microbial communities in various habitats. Overall, the traits of Schaalia cardiffensis F0333 highlight its potential ecological significance in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusSchaalia
SpeciesSchaalia cardiffensis
StrainF0333

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Schaalia cardiffensis F0333 contig00042, whole genome shotgun

Gene Summary

Adenine Count

421242 bp

Thymine Count

421742 bp

Guanine Count

669622 bp

Cytosine Count

676294 bp

Genome Length

2188900 bp

Protein-coding Genes

1983 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive142 - 1681Not Available
tyrosine--trna ligaseHMPREF9004_0001Not AvailableNegative502 - 177346522.6
23s ribosomal rnaNot AvailableNot AvailablePositive2022 - 5161Not Available
argininosuccinate lyaseHMPREF9004_0002Not AvailableNegative1848 - 328451229.9
hypothetical proteinHMPREF9004_0003Not AvailableNegative3327 - 472750692.9
5s ribosomal rnaNot AvailableNot AvailablePositive5306 - 5422Not Available
argininosuccinate synthaseHMPREF9004_0004Not AvailableNegative5078 - 630144836.0
arginine repressorHMPREF9004_0005Not AvailableNegative6346 - 686118561.3
acetylornithine transaminaseHMPREF9004_0006Not AvailableNegative6858 - 816545783.1
arginine biosynthesis argjHMPREF9004_0007Not AvailableNegative8162 - 929538954.8

Displaying genes 1 – 10 of 2036 in total

Metabolites

1792 records
Metabolite IDMetabolite nameStructureCAS number
BASm0019668CDP-DG(12:0/12:0)C36H65N3O15P2Chemical structure of CDP-DG(12:0/12:0)NULL
Average841.87Da
Monoisotopic841.389092401Da
BASm0019669CDP-DG(12:0/14:0(3-OH))C38H69N3O16P2Chemical structure of CDP-DG(12:0/14:0(3-OH))NULL
Average885.923Da
Monoisotopic885.41530715Da
BASm0019670CDP-DG(12:0/17:0cycw7c)C41H73N3O15P2Chemical structure of CDP-DG(12:0/17:0cycw7c)NULL
Average909.989Da
Monoisotopic909.451692659Da
BASm0019671CDP-DG(12:0/19:iso)C43H79N3O15P2Chemical structure of CDP-DG(12:0/19:iso)NULL
Average940.059Da
Monoisotopic939.498642852Da
BASm0019672CDP-DG(14:0(3-OH)/12:0(3-OH))C38H69N3O17P2Chemical structure of CDP-DG(14:0(3-OH)/12:0(3-OH))NULL
Average901.922Da
Monoisotopic901.41022177Da
BASm0019673CDP-DG(14:0(3-OH)/12:0)C38H69N3O16P2Chemical structure of CDP-DG(14:0(3-OH)/12:0)NULL
Average885.923Da
Monoisotopic885.41530715Da
BASm0019674CDP-DG(14:0(3-OH)/14:0(3-OH))C40H73N3O17P2Chemical structure of CDP-DG(14:0(3-OH)/14:0(3-OH))NULL
Average929.976Da
Monoisotopic929.441521899Da
BASm0019675CDP-DG(14:0(3-OH)/14:0)C40H73N3O16P2Chemical structure of CDP-DG(14:0(3-OH)/14:0)NULL
Average913.977Da
Monoisotopic913.446607279Da
BASm0019676CDP-DG(14:0(3-OH)/16:0)C42H77N3O16P2Chemical structure of CDP-DG(14:0(3-OH)/16:0)NULL
Average942.031Da
Monoisotopic941.477907407Da
BASm0019677CDP-DG(14:0(3-OH)/16:1(9Z))C42H75N3O16P2Chemical structure of CDP-DG(14:0(3-OH)/16:1(9Z))NULL
Average940.015Da
Monoisotopic939.462257343Da

Displaying 1451–1460 of 1792 metabolites

Health Effects

No health effects information available for this bacterium.