Schaalia cardiffensis F0333

Gram-positiveNon-motileanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Schaalia

Description

Schaalia cardiffensis F0333 is a Gram-positive, anaerobic bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy while utilizing them for carbon as well. This organism possesses flagella, which are typically associated with mobility; however, it is noted that Schaalia cardiffensis F0333 does not exhibit mobility. The presence of a single replicon suggests a streamlined genomic structure, which can be advantageous for efficient replication and stability in its anaerobic environment. The accession number for this strain is AQHZ00000000.1, providing a reference for genetic and genomic studies. Understanding the traits of Schaalia cardiffensis F0333 can contribute to insights into its ecological role. As an anaerobic, chemoheterotrophic organism, it may play a significant role in nutrient cycling within its environment, particularly in anaerobic ecosystems where the breakdown of organic matter is crucial. This bacterium could be involved in processes such as fermentation or the degradation of complex organic substances, which are important for maintaining the balance of microbial communities in various habitats. Overall, the traits of Schaalia cardiffensis F0333 highlight its potential ecological significance in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusSchaalia
SpeciesSchaalia cardiffensis
StrainF0333

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Schaalia cardiffensis F0333 contig00042, whole genome shotgun

Gene Summary

Adenine Count

421242 bp

Thymine Count

421742 bp

Guanine Count

669622 bp

Cytosine Count

676294 bp

Genome Length

2188900 bp

Protein-coding Genes

1983 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive142 - 1681Not Available
tyrosine--trna ligaseHMPREF9004_0001Not AvailableNegative502 - 177346522.6
23s ribosomal rnaNot AvailableNot AvailablePositive2022 - 5161Not Available
argininosuccinate lyaseHMPREF9004_0002Not AvailableNegative1848 - 328451229.9
hypothetical proteinHMPREF9004_0003Not AvailableNegative3327 - 472750692.9
5s ribosomal rnaNot AvailableNot AvailablePositive5306 - 5422Not Available
argininosuccinate synthaseHMPREF9004_0004Not AvailableNegative5078 - 630144836.0
arginine repressorHMPREF9004_0005Not AvailableNegative6346 - 686118561.3
acetylornithine transaminaseHMPREF9004_0006Not AvailableNegative6858 - 816545783.1
arginine biosynthesis argjHMPREF9004_0007Not AvailableNegative8162 - 929538954.8

Displaying genes 1 – 10 of 2036 in total

Metabolites

1792 records
Metabolite IDMetabolite nameStructureCAS number
BASm0019647CDP-DG(10:0(3-OH)/16:1(9Z))C38H67N3O16P2Chemical structure of CDP-DG(10:0(3-OH)/16:1(9Z))NULL
Average883.907Da
Monoisotopic883.399657085Da
BASm0019648CDP-DG(10:0(3-OH)/17:0cycw7c)C39H69N3O16P2Chemical structure of CDP-DG(10:0(3-OH)/17:0cycw7c)NULL
Average897.934Da
Monoisotopic897.41530715Da
BASm0019649CDP-DG(10:0(3-OH)/19:0cycv8c)C41H73N3O16P2Chemical structure of CDP-DG(10:0(3-OH)/19:0cycv8c)NULL
Average925.988Da
Monoisotopic925.446607279Da
BASm0019650CDP-DG(10:0(3-OH)/19:iso)C41H75N3O16P2Chemical structure of CDP-DG(10:0(3-OH)/19:iso)NULL
Average928.004Da
Monoisotopic927.462257343Da
BASm0019652CDP-DG(10:0/12:0(3-OH))C34H61N3O16P2Chemical structure of CDP-DG(10:0/12:0(3-OH))NULL
Average829.815Da
Monoisotopic829.352706892Da
BASm0019653CDP-DG(10:0/17:0cycw7c)C39H69N3O15P2Chemical structure of CDP-DG(10:0/17:0cycw7c)NULL
Average881.935Da
Monoisotopic881.42039253Da
BASm0019654CDP-DG(12:0(3-OH)/10:0(3-OH))C34H61N3O17P2Chemical structure of CDP-DG(12:0(3-OH)/10:0(3-OH))NULL
Average845.814Da
Monoisotopic845.347621512Da
BASm0019655CDP-DG(12:0(3-OH)/10:0)C34H61N3O16P2Chemical structure of CDP-DG(12:0(3-OH)/10:0)NULL
Average829.815Da
Monoisotopic829.352706892Da
BASm0019656CDP-DG(12:0(3-OH)/12:0(3-OH))C36H65N3O17P2Chemical structure of CDP-DG(12:0(3-OH)/12:0(3-OH))NULL
Average873.868Da
Monoisotopic873.378921641Da
BASm0019657CDP-DG(12:0(3-OH)/12:0)C36H65N3O16P2Chemical structure of CDP-DG(12:0(3-OH)/12:0)NULL
Average857.869Da
Monoisotopic857.384007021Da

Displaying 1431–1440 of 1792 metabolites

Health Effects

No health effects information available for this bacterium.