Schaalia cardiffensis F0333

Gram-positiveNon-motileanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Schaalia

Description

Schaalia cardiffensis F0333 is a Gram-positive, anaerobic bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy while utilizing them for carbon as well. This organism possesses flagella, which are typically associated with mobility; however, it is noted that Schaalia cardiffensis F0333 does not exhibit mobility. The presence of a single replicon suggests a streamlined genomic structure, which can be advantageous for efficient replication and stability in its anaerobic environment. The accession number for this strain is AQHZ00000000.1, providing a reference for genetic and genomic studies. Understanding the traits of Schaalia cardiffensis F0333 can contribute to insights into its ecological role. As an anaerobic, chemoheterotrophic organism, it may play a significant role in nutrient cycling within its environment, particularly in anaerobic ecosystems where the breakdown of organic matter is crucial. This bacterium could be involved in processes such as fermentation or the degradation of complex organic substances, which are important for maintaining the balance of microbial communities in various habitats. Overall, the traits of Schaalia cardiffensis F0333 highlight its potential ecological significance in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusSchaalia
SpeciesSchaalia cardiffensis
StrainF0333

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Schaalia cardiffensis F0333 contig00042, whole genome shotgun

Gene Summary

Adenine Count

421242 bp

Thymine Count

421742 bp

Guanine Count

669622 bp

Cytosine Count

676294 bp

Genome Length

2188900 bp

Protein-coding Genes

1983 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive142 - 1681Not Available
tyrosine--trna ligaseHMPREF9004_0001Not AvailableNegative502 - 177346522.6
23s ribosomal rnaNot AvailableNot AvailablePositive2022 - 5161Not Available
argininosuccinate lyaseHMPREF9004_0002Not AvailableNegative1848 - 328451229.9
hypothetical proteinHMPREF9004_0003Not AvailableNegative3327 - 472750692.9
5s ribosomal rnaNot AvailableNot AvailablePositive5306 - 5422Not Available
argininosuccinate synthaseHMPREF9004_0004Not AvailableNegative5078 - 630144836.0
arginine repressorHMPREF9004_0005Not AvailableNegative6346 - 686118561.3
acetylornithine transaminaseHMPREF9004_0006Not AvailableNegative6858 - 816545783.1
arginine biosynthesis argjHMPREF9004_0007Not AvailableNegative8162 - 929538954.8

Displaying genes 1 – 10 of 2036 in total

Metabolites

1792 records
Metabolite IDMetabolite nameStructureCAS number
BASm0018782PG(16:0/10:0(3-OH))C32H63O11PChemical structure of PG(16:0/10:0(3-OH))NULL
Average654.819Da
Monoisotopic654.410799847Da
BASm0018783PG(16:1(9Z)/10:0(3-OH))C32H61O11PChemical structure of PG(16:1(9Z)/10:0(3-OH))NULL
Average652.803Da
Monoisotopic652.395149782Da
BASm0018784PG(17:0cycw7c/10:0(3-OH))C33H63O11PChemical structure of PG(17:0cycw7c/10:0(3-OH))NULL
Average666.83Da
Monoisotopic666.410799847Da
BASm0018785PG(18:1(9Z)/10:0(3-OH))C34H65O11PChemical structure of PG(18:1(9Z)/10:0(3-OH))NULL
Average680.857Da
Monoisotopic680.426449911Da
BASm0018786PG(19:0cycv8c/10:0(3-OH))C35H67O11PChemical structure of PG(19:0cycv8c/10:0(3-OH))NULL
Average694.884Da
Monoisotopic694.442099975Da
BASm0018788PG(10:0(3-OH)/10:0)C26H51O11PChemical structure of PG(10:0(3-OH)/10:0)NULL
Average570.657Da
Monoisotopic570.31689946Da
BASm0018789PG(12:0(3-OH)/10:0)C28H55O11PChemical structure of PG(12:0(3-OH)/10:0)NULL
Average598.711Da
Monoisotopic598.348199589Da
BASm0018792PG(10:0/12:0(3-OH))C28H55O11PChemical structure of PG(10:0/12:0(3-OH))NULL
Average598.711Da
Monoisotopic598.348199589Da
BASm0018793PG(10:0(3-OH)/12:0(3-OH))C28H55O12PChemical structure of PG(10:0(3-OH)/12:0(3-OH))NULL
Average614.71Da
Monoisotopic614.343114209Da
BASm0018794PG(12:0/12:0(3-OH))C30H59O11PChemical structure of PG(12:0/12:0(3-OH))NULL
Average626.765Da
Monoisotopic626.379499718Da

Displaying 1131–1140 of 1792 metabolites

Health Effects

No health effects information available for this bacterium.