Schaalia cardiffensis F0333

Gram-positiveNon-motileanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Schaalia

Description

Schaalia cardiffensis F0333 is a Gram-positive, anaerobic bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy while utilizing them for carbon as well. This organism possesses flagella, which are typically associated with mobility; however, it is noted that Schaalia cardiffensis F0333 does not exhibit mobility. The presence of a single replicon suggests a streamlined genomic structure, which can be advantageous for efficient replication and stability in its anaerobic environment. The accession number for this strain is AQHZ00000000.1, providing a reference for genetic and genomic studies. Understanding the traits of Schaalia cardiffensis F0333 can contribute to insights into its ecological role. As an anaerobic, chemoheterotrophic organism, it may play a significant role in nutrient cycling within its environment, particularly in anaerobic ecosystems where the breakdown of organic matter is crucial. This bacterium could be involved in processes such as fermentation or the degradation of complex organic substances, which are important for maintaining the balance of microbial communities in various habitats. Overall, the traits of Schaalia cardiffensis F0333 highlight its potential ecological significance in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusSchaalia
SpeciesSchaalia cardiffensis
StrainF0333

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Schaalia cardiffensis F0333 contig00042, whole genome shotgun

Gene Summary

Adenine Count

421242 bp

Thymine Count

421742 bp

Guanine Count

669622 bp

Cytosine Count

676294 bp

Genome Length

2188900 bp

Protein-coding Genes

1983 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive142 - 1681Not Available
tyrosine--trna ligaseHMPREF9004_0001Not AvailableNegative502 - 177346522.6
23s ribosomal rnaNot AvailableNot AvailablePositive2022 - 5161Not Available
argininosuccinate lyaseHMPREF9004_0002Not AvailableNegative1848 - 328451229.9
hypothetical proteinHMPREF9004_0003Not AvailableNegative3327 - 472750692.9
5s ribosomal rnaNot AvailableNot AvailablePositive5306 - 5422Not Available
argininosuccinate synthaseHMPREF9004_0004Not AvailableNegative5078 - 630144836.0
arginine repressorHMPREF9004_0005Not AvailableNegative6346 - 686118561.3
acetylornithine transaminaseHMPREF9004_0006Not AvailableNegative6858 - 816545783.1
arginine biosynthesis argjHMPREF9004_0007Not AvailableNegative8162 - 929538954.8

Displaying genes 1 – 10 of 2036 in total

Metabolites

1792 records
Metabolite IDMetabolite nameStructureCAS number
BASm0018591PE(10:0(3-OH)/16:1(9Z))C31H60NO9PChemical structure of PE(10:0(3-OH)/16:1(9Z))NULL
Average621.793Da
Monoisotopic621.400569514Da
BASm0018592PE(10:0(3-OH)/17:0cycw7c)C32H62NO9PChemical structure of PE(10:0(3-OH)/17:0cycw7c)NULL
Average635.82Da
Monoisotopic635.416219578Da
BASm0018593PE(10:0(3-OH)/18:1(9Z))C33H64NO9PChemical structure of PE(10:0(3-OH)/18:1(9Z))NULL
Average649.847Da
Monoisotopic649.431869643Da
BASm0018594PE(10:0(3-OH)/19:0cycv8c)C34H66NO9PChemical structure of PE(10:0(3-OH)/19:0cycv8c)NULL
Average663.874Da
Monoisotopic663.447519707Da
BASm0018595PE(10:0(3-OH)/19:iso)C34H68NO9PChemical structure of PE(10:0(3-OH)/19:iso)NULL
Average665.89Da
Monoisotopic665.463169772Da
BASm0018597PE(10:0/12:0(3-OH))C27H54NO9PChemical structure of PE(10:0/12:0(3-OH))NULL
Average567.701Da
Monoisotopic567.353619321Da
BASm0018598PE(10:0/14:0(3-OH))C29H58NO9PChemical structure of PE(10:0/14:0(3-OH))NULL
Average595.755Da
Monoisotopic595.38491945Da
BASm0018599PE(10:0/19:iso)C34H68NO8PChemical structure of PE(10:0/19:iso)NULL
Average649.891Da
Monoisotopic649.468255152Da
BASm0018600PE(12:0(3-OH)/10:0)C27H54NO9PChemical structure of PE(12:0(3-OH)/10:0)NULL
Average567.701Da
Monoisotopic567.353619321Da
BASm0018601PE(12:0(3-OH)/10:0(3-OH))C27H54NO10PChemical structure of PE(12:0(3-OH)/10:0(3-OH))NULL
Average583.7Da
Monoisotopic583.348533941Da

Displaying 1001–1010 of 1792 metabolites

Health Effects

No health effects information available for this bacterium.