Schaalia cardiffensis F0333

Gram-positiveNon-motileanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Schaalia

Description

Schaalia cardiffensis F0333 is a Gram-positive, anaerobic bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy while utilizing them for carbon as well. This organism possesses flagella, which are typically associated with mobility; however, it is noted that Schaalia cardiffensis F0333 does not exhibit mobility. The presence of a single replicon suggests a streamlined genomic structure, which can be advantageous for efficient replication and stability in its anaerobic environment. The accession number for this strain is AQHZ00000000.1, providing a reference for genetic and genomic studies. Understanding the traits of Schaalia cardiffensis F0333 can contribute to insights into its ecological role. As an anaerobic, chemoheterotrophic organism, it may play a significant role in nutrient cycling within its environment, particularly in anaerobic ecosystems where the breakdown of organic matter is crucial. This bacterium could be involved in processes such as fermentation or the degradation of complex organic substances, which are important for maintaining the balance of microbial communities in various habitats. Overall, the traits of Schaalia cardiffensis F0333 highlight its potential ecological significance in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusSchaalia
SpeciesSchaalia cardiffensis
StrainF0333

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Schaalia cardiffensis F0333 contig00042, whole genome shotgun

Gene Summary

Adenine Count

421242 bp

Thymine Count

421742 bp

Guanine Count

669622 bp

Cytosine Count

676294 bp

Genome Length

2188900 bp

Protein-coding Genes

1983 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetyl-gamma-glutamyl-phosphate reductaseHMPREF9004_0008Not AvailableNegative9376 - 1044936794.3
hypothetical proteinHMPREF9004_0009Not AvailableNegative10559 - 1105317914.2
phenylalanyl-trna synthetase beta subunitHMPREF9004_0010Not AvailableNegative11171 - 1381393923.1
phenylalanyl-trna synthetase alpha subunitHMPREF9004_0011Not AvailableNegative13821 - 1490639003.4
methionyl aminopeptidaseHMPREF9004_0012Not AvailablePositive15299 - 1618632690.0
hypothetical proteinHMPREF9004_0013Not AvailableNegative16332 - 1675715316.2
polyphosphate-glucose phosphotransferaseHMPREF9004_0014Not AvailablePositive16674 - 1756131412.0
aconitate hydratase 1HMPREF9004_0015Not AvailableNegative17786 - 2047696925.3
phospholipid n-methyltransferaseHMPREF9004_0016Not AvailablePositive20588 - 208579993.13
23s rrna (uracil-5-)-methyltransferase rumaHMPREF9004_0017Not AvailableNegative20914 - 2223347286.3

Displaying genes 11 – 20 of 2036 in total

Metabolites

1792 records
Metabolite IDMetabolite nameStructureCAS number
BASm0008099(2E)-4-hydroxy-3-methylbut-2-enyl diphosphateC5H9O8P2Chemical structure of (2E)-4-hydroxy-3-methylbut-2-enyl diphosphateNot available
Average259.0677Da
Monoisotopic258.9772653Da
BASm00087783-oxocholan-24-oyl-CoAC45H68N7O18P3SChemical structure of 3-oxocholan-24-oyl-CoANot available
Average1120.05Da
Monoisotopic1119.357635Da
BASm00090273alpha,7beta-dihydroxy-12-oxo-5beta-cholan-24-oateC24H37O5Chemical structure of 3alpha,7beta-dihydroxy-12-oxo-5beta-cholan-24-oateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00096213-oxochol-4,6-dien-24-oyl-CoAC45H64N7O18P3SChemical structure of 3-oxochol-4,6-dien-24-oyl-CoANot available
Average1116.02Da
Monoisotopic1115.326334736Da
BASm00096247beta-hydroxy-3-oxochol-24-oyl-CoAC45H68N7O19P3SChemical structure of 7beta-hydroxy-3-oxochol-24-oyl-CoANot available
Average1136.05Da
Monoisotopic1135.352549485Da
BASm00096755,6,7,8-Tetrahydrofolic acidC19H21N7O6Chemical structure of 5,6,7,8-Tetrahydrofolic acid135-16-0
Average443.421Da
Monoisotopic443.156428584Da
BASm0009937Adenosine diphosphate riboseC15H23N5O14P2Chemical structure of Adenosine diphosphate ribose20762-30-5
Average559.3157Da
Monoisotopic559.0716735Da
BASm00111337alpha-hydroxy-3,12-dioxo-5beta-cholanateC24H35O5Chemical structure of 7alpha-hydroxy-3,12-dioxo-5beta-cholanateNot available
Average403.54Da
Monoisotopic403.2489978Da
BASm0012579N-acetyl-D-glutamateC7H9NO5Not availableNot available
Average187.152Da
Monoisotopic187.049169554Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da

Displaying 61–70 of 1792 metabolites

Health Effects

No health effects information available for this bacterium.