Schaalia cardiffensis F0333

Gram-positiveNon-motileanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Schaalia

Description

Schaalia cardiffensis F0333 is a Gram-positive, anaerobic bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy while utilizing them for carbon as well. This organism possesses flagella, which are typically associated with mobility; however, it is noted that Schaalia cardiffensis F0333 does not exhibit mobility. The presence of a single replicon suggests a streamlined genomic structure, which can be advantageous for efficient replication and stability in its anaerobic environment. The accession number for this strain is AQHZ00000000.1, providing a reference for genetic and genomic studies. Understanding the traits of Schaalia cardiffensis F0333 can contribute to insights into its ecological role. As an anaerobic, chemoheterotrophic organism, it may play a significant role in nutrient cycling within its environment, particularly in anaerobic ecosystems where the breakdown of organic matter is crucial. This bacterium could be involved in processes such as fermentation or the degradation of complex organic substances, which are important for maintaining the balance of microbial communities in various habitats. Overall, the traits of Schaalia cardiffensis F0333 highlight its potential ecological significance in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusSchaalia
SpeciesSchaalia cardiffensis
StrainF0333

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Schaalia cardiffensis F0333 contig00042, whole genome shotgun

Gene Summary

Adenine Count

421242 bp

Thymine Count

421742 bp

Guanine Count

669622 bp

Cytosine Count

676294 bp

Genome Length

2188900 bp

Protein-coding Genes

1983 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetyl-gamma-glutamyl-phosphate reductaseHMPREF9004_0008Not AvailableNegative9376 - 1044936794.3
hypothetical proteinHMPREF9004_0009Not AvailableNegative10559 - 1105317914.2
phenylalanyl-trna synthetase beta subunitHMPREF9004_0010Not AvailableNegative11171 - 1381393923.1
phenylalanyl-trna synthetase alpha subunitHMPREF9004_0011Not AvailableNegative13821 - 1490639003.4
methionyl aminopeptidaseHMPREF9004_0012Not AvailablePositive15299 - 1618632690.0
hypothetical proteinHMPREF9004_0013Not AvailableNegative16332 - 1675715316.2
polyphosphate-glucose phosphotransferaseHMPREF9004_0014Not AvailablePositive16674 - 1756131412.0
aconitate hydratase 1HMPREF9004_0015Not AvailableNegative17786 - 2047696925.3
phospholipid n-methyltransferaseHMPREF9004_0016Not AvailablePositive20588 - 208579993.13
23s rrna (uracil-5-)-methyltransferase rumaHMPREF9004_0017Not AvailableNegative20914 - 2223347286.3

Displaying genes 11 – 20 of 2036 in total

Metabolites

1792 records
Metabolite IDMetabolite nameStructureCAS number
BASm0005442glycyl-L-asparagineC6H11N3O4Not availableNot available
Average189.171Da
Monoisotopic189.074955846Da
BASm0005445L-methionyl-L-alanineC8H16N2O3SChemical structure of L-methionyl-L-alanineNot available
Average220.29Da
Monoisotopic220.088163557Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm00055071-tetradecanoyl-2-(9Z)-octadecenoyl-sn-glycero-3-phosphateC35H67O8PChemical structure of 1-tetradecanoyl-2-(9Z)-octadecenoyl-sn-glycero-3-phosphateNot available
Average646.887Da
Monoisotopic646.4573561Da
BASm00060381-hexadecanoyl-2-dodecanoyl-sn-glycero-3-phospho-(1'-sn-glycerol)C34H67O10PChemical structure of 1-hexadecanoyl-2-dodecanoyl-sn-glycero-3-phospho-(1'-sn-glycerol)Not available
Average666.874Da
Monoisotopic666.4471854Da
BASm0006202(2S)-2-acetamido-4-aminobutanoateC6H12N2O3Chemical structure of (2S)-2-acetamido-4-aminobutanoateNot available
Average160.173Da
Monoisotopic160.084792254Da
BASm0006316hydrogenobyrinateC45H60N4O14Chemical structure of hydrogenobyrinateNot available
Average880.989Da
Monoisotopic880.4106026Da
BASm00065953beta-hydroxy-7-oxo-5beta-cholan-24-oateC24H37O4Chemical structure of 3beta-hydroxy-7-oxo-5beta-cholan-24-oateNot available
Average389.557Da
Monoisotopic389.2697333Da
BASm0006855(R)-lipoateC8H14O2S2Chemical structure of (R)-lipoate1200-22-2
Average206.326Da
Monoisotopic206.0435211Da
BASm0007624lithocholoyl-CoAC45H70N7O18P3SChemical structure of lithocholoyl-CoANot available
Average1122.07Da
Monoisotopic1121.373285Da

Displaying 51–60 of 1792 metabolites

Health Effects

No health effects information available for this bacterium.