Schaalia cardiffensis F0333

Gram-positiveNon-motileanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Schaalia

Description

Schaalia cardiffensis F0333 is a Gram-positive, anaerobic bacterium characterized as a chemoheterotroph, indicating its reliance on organic compounds for energy while utilizing them for carbon as well. This organism possesses flagella, which are typically associated with mobility; however, it is noted that Schaalia cardiffensis F0333 does not exhibit mobility. The presence of a single replicon suggests a streamlined genomic structure, which can be advantageous for efficient replication and stability in its anaerobic environment. The accession number for this strain is AQHZ00000000.1, providing a reference for genetic and genomic studies. Understanding the traits of Schaalia cardiffensis F0333 can contribute to insights into its ecological role. As an anaerobic, chemoheterotrophic organism, it may play a significant role in nutrient cycling within its environment, particularly in anaerobic ecosystems where the breakdown of organic matter is crucial. This bacterium could be involved in processes such as fermentation or the degradation of complex organic substances, which are important for maintaining the balance of microbial communities in various habitats. Overall, the traits of Schaalia cardiffensis F0333 highlight its potential ecological significance in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusSchaalia
SpeciesSchaalia cardiffensis
StrainF0333

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Schaalia cardiffensis F0333 contig00042, whole genome shotgun

Gene Summary

Adenine Count

421242 bp

Thymine Count

421742 bp

Guanine Count

669622 bp

Cytosine Count

676294 bp

Genome Length

2188900 bp

Protein-coding Genes

1983 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive142 - 1681Not Available
tyrosine--trna ligaseHMPREF9004_0001Not AvailableNegative502 - 177346522.6
23s ribosomal rnaNot AvailableNot AvailablePositive2022 - 5161Not Available
argininosuccinate lyaseHMPREF9004_0002Not AvailableNegative1848 - 328451229.9
hypothetical proteinHMPREF9004_0003Not AvailableNegative3327 - 472750692.9
5s ribosomal rnaNot AvailableNot AvailablePositive5306 - 5422Not Available
argininosuccinate synthaseHMPREF9004_0004Not AvailableNegative5078 - 630144836.0
arginine repressorHMPREF9004_0005Not AvailableNegative6346 - 686118561.3
acetylornithine transaminaseHMPREF9004_0006Not AvailableNegative6858 - 816545783.1
arginine biosynthesis argjHMPREF9004_0007Not AvailableNegative8162 - 929538954.8

Displaying genes 1 – 10 of 2036 in total

Metabolites

1792 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017304Glyceric acid 1,3-biphosphateC3H8O10P2Not available1981-49-3
Average266.035Da
Monoisotopic265.959270454Da
BASm0017305Propionyl-CoAC24H40N7O17P3SChemical structure of Propionyl-CoA317-66-8
Average823.597Da
Monoisotopic823.141423115Da
BASm00173062,3-Diphosphoglyceric acidC3H8O10P2Chemical structure of 2,3-Diphosphoglyceric acid138-81-8
Average266.0371Da
Monoisotopic265.9592695Da
BASm0017307L-D-1-Pyrroline-5-carboxylic acidC5H7NO2Chemical structure of L-D-1-Pyrroline-5-carboxylic acid2906-39-0
Average113.1146Da
Monoisotopic113.047678473Da
BASm00173085'-Phosphoribosyl-N-formylglycineamideC8H15N2O9PChemical structure of 5'-Phosphoribosyl-N-formylglycineamideNULL
Average314.1865Da
Monoisotopic314.0515166Da
BASm0017309D-Myo-inositol 4-phosphateC6H13O9PChemical structure of D-Myo-inositol 4-phosphate46495-39-0
Average260.1358Da
Monoisotopic260.029718526Da
BASm0017310dTDP-D-GlucoseC16H26N2O16P2Chemical structure of dTDP-D-Glucose2196-62-5
Average564.329Da
Monoisotopic564.075755818Da
BASm0017311Adenylsuccinic acidC14H18N5O11PChemical structure of Adenylsuccinic acid19046-78-7
Average463.2934Da
Monoisotopic463.074042955Da
BASm0017312Palmityl-CoAC37H66N7O17P3SChemical structure of Palmityl-CoA1763-10-6
Average1005.943Da
Monoisotopic1005.344873947Da
BASm00173165,10-Methylene-THFC20H23N7O6Chemical structure of 5,10-Methylene-THF31690-11-6
Average457.4399Da
Monoisotopic457.170981503Da

Displaying 131–140 of 1792 metabolites

Health Effects

No health effects information available for this bacterium.