Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00676 | Not Available | Positive | 806356 - 807117 | 28674.7 |
| hypothetical protein | HMPREF1534_00677 | Not Available | Negative | 807126 - 808160 | 39523.7 |
| hypothetical protein | HMPREF1534_00678 | Not Available | Positive | 808957 - 809601 | 23304.9 |
| hypothetical protein | HMPREF1534_00679 | Not Available | Positive | 809612 - 810037 | 16105.8 |
| hypothetical protein | HMPREF1534_00680 | Not Available | Positive | 810034 - 810909 | 31697.7 |
| hypothetical protein | HMPREF1534_00681 | Not Available | Positive | 810937 - 812433 | 56711.2 |
| hypothetical protein | HMPREF1534_00682 | Not Available | Positive | 812523 - 812843 | 11896.6 |
| hypothetical protein | HMPREF1534_00683 | Not Available | Positive | 812870 - 813034 | 5627.87 |
| hypothetical protein | HMPREF1534_00684 | Not Available | Positive | 813152 - 814438 | 49043.0 |
| hypothetical protein | HMPREF1534_00685 | Not Available | Positive | 814616 - 816385 | 63226.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


