Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_00606 | Not Available | Negative | 741492 - 741567 | 2816.46 |
| hypothetical protein | HMPREF1534_00607 | Not Available | Positive | 741628 - 742914 | 49043.0 |
| hypothetical protein | HMPREF1534_00608 | Not Available | Negative | 743019 - 743549 | 21497.8 |
| hypothetical protein | HMPREF1534_00609 | Not Available | Negative | 744320 - 744898 | 22552.2 |
| hypothetical protein | HMPREF1534_00610 | Not Available | Negative | 744891 - 745121 | 9163.69 |
| hypothetical protein | HMPREF1534_00611 | Not Available | Negative | 745132 - 745812 | 25773.4 |
| hypothetical protein | HMPREF1534_00612 | Not Available | Positive | 745903 - 746013 | 4342.17 |
| hypothetical protein | HMPREF1534_00613 | Not Available | Negative | 745962 - 746306 | 13233.8 |
| hypothetical protein | HMPREF1534_00614 | Not Available | Negative | 746310 - 746651 | 12935.2 |
| hypothetical protein | HMPREF1534_00615 | Not Available | Negative | 746648 - 746809 | 6164.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


