Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03643 | Not Available | Negative | 4134721 - 4135320 | 23400.9 |
| hypothetical protein | HMPREF1534_03644 | Not Available | Negative | 4135326 - 4135493 | 6230.67 |
| hypothetical protein | HMPREF1534_03645 | Not Available | Negative | 4135600 - 4136010 | 15264.6 |
| hypothetical protein | HMPREF1534_03646 | Not Available | Negative | 4136000 - 4137247 | 47856.2 |
| hypothetical protein | HMPREF1534_03647 | Not Available | Negative | 4137433 - 4138368 | 35927.9 |
| hypothetical protein | HMPREF1534_03648 | Not Available | Negative | 4138375 - 4140102 | 66952.1 |
| hypothetical protein | HMPREF1534_03649 | Not Available | Negative | 4140254 - 4142578 | 87134.8 |
| hypothetical protein | HMPREF1534_03650 | Not Available | Negative | 4142607 - 4143095 | 18877.2 |
| hypothetical protein | HMPREF1534_03651 | Not Available | Negative | 4143123 - 4143551 | 16128.6 |
| hypothetical protein | HMPREF1534_03652 | Not Available | Negative | 4143597 - 4145234 | 62869.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


