Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03193 | Not Available | Positive | 3636364 - 3639693 | 128752.0 |
| hypothetical protein | HMPREF1534_03194 | Not Available | Positive | 3639780 - 3641303 | 57857.1 |
| hypothetical protein | HMPREF1534_03195 | Not Available | Negative | 3641562 - 3643037 | 54273.1 |
| hypothetical protein | HMPREF1534_03196 | Not Available | Negative | 3643223 - 3644179 | 36024.3 |
| hypothetical protein | HMPREF1534_03197 | Not Available | Negative | 3644219 - 3645616 | 50205.4 |
| hypothetical protein | HMPREF1534_03198 | Not Available | Positive | 3646485 - 3646982 | 19935.1 |
| hypothetical protein | HMPREF1534_03199 | Not Available | Positive | 3647027 - 3649699 | 93211.6 |
| hypothetical protein | HMPREF1534_03200 | Not Available | Negative | 3650207 - 3650377 | 6234.55 |
| hypothetical protein | HMPREF1534_03201 | Not Available | Positive | 3651055 - 3653502 | 94682.2 |
| hypothetical protein | HMPREF1534_03202 | Not Available | Negative | 3653561 - 3654643 | 41170.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


