Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03072 | Not Available | Positive | 3480654 - 3482645 | 72563.0 |
| hypothetical protein | HMPREF1534_03073 | Not Available | Negative | 3482800 - 3483411 | 23178.9 |
| hypothetical protein | HMPREF1534_03074 | Not Available | Positive | 3484162 - 3486480 | 87294.9 |
| hypothetical protein | HMPREF1534_03075 | Not Available | Positive | 3486515 - 3488392 | 70385.7 |
| hypothetical protein | HMPREF1534_03076 | Not Available | Positive | 3488491 - 3489651 | 41631.8 |
| hypothetical protein | HMPREF1534_03077 | Not Available | Positive | 3489654 - 3490541 | 32482.4 |
| hypothetical protein | HMPREF1534_03078 | Not Available | Positive | 3490760 - 3493492 | 102188.0 |
| hypothetical protein | HMPREF1534_03079 | Not Available | Negative | 3493643 - 3494071 | 15735.3 |
| hypothetical protein | HMPREF1534_03080 | Not Available | Negative | 3494083 - 3495381 | 49393.9 |
| hypothetical protein | HMPREF1534_03081 | Not Available | Positive | 3495497 - 3496135 | 24085.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


