Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_02961 | Not Available | Positive | 3377115 - 3378959 | 70247.0 |
| hypothetical protein | HMPREF1534_02962 | Not Available | Positive | 3378971 - 3379849 | 33952.7 |
| hypothetical protein | HMPREF1534_02963 | Not Available | Positive | 3379861 - 3381021 | 44493.7 |
| hypothetical protein | HMPREF1534_02964 | Not Available | Positive | 3381042 - 3382004 | 36721.1 |
| hypothetical protein | HMPREF1534_02965 | Not Available | Positive | 3382023 - 3382526 | 19391.9 |
| hypothetical protein | HMPREF1534_02966 | Not Available | Positive | 3382539 - 3383054 | 20766.9 |
| hypothetical protein | HMPREF1534_02967 | Not Available | Positive | 3383056 - 3383961 | 34702.5 |
| hypothetical protein | HMPREF1534_02968 | Not Available | Positive | 3383970 - 3386462 | 95632.5 |
| hypothetical protein | HMPREF1534_02969 | Not Available | Positive | 3386487 - 3387635 | 44363.4 |
| hypothetical protein | HMPREF1534_02970 | Not Available | Positive | 3387651 - 3388358 | 28321.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


