Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_02541 | Not Available | Positive | 2917196 - 2917522 | 12818.6 |
| hypothetical protein | HMPREF1534_02542 | Not Available | Positive | 2917912 - 2918238 | 12284.0 |
| hypothetical protein | HMPREF1534_02543 | Not Available | Negative | 2918482 - 2918655 | 6610.28 |
| hypothetical protein | HMPREF1534_02544 | Not Available | Negative | 2918625 - 2920112 | 57721.7 |
| hypothetical protein | HMPREF1534_02545 | Not Available | Positive | 2921647 - 2924478 | 111026.0 |
| hypothetical protein | HMPREF1534_02546 | Not Available | Positive | 2924436 - 2925383 | 36960.7 |
| hypothetical protein | HMPREF1534_02547 | Not Available | Positive | 2925417 - 2925551 | 5045.02 |
| hypothetical protein | HMPREF1534_02548 | Not Available | Positive | 2925669 - 2926037 | 13974.9 |
| hypothetical protein | HMPREF1534_02549 | Not Available | Positive | 2926204 - 2926446 | 8961.99 |
| hypothetical protein | HMPREF1534_02550 | Not Available | Negative | 2926562 - 2926744 | 7235.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


