Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_02339 | Not Available | Positive | 2661408 - 2662067 | 25133.7 |
| hypothetical protein | HMPREF1534_02340 | Not Available | Positive | 2662135 - 2664750 | 100797.0 |
| hypothetical protein | HMPREF1534_02341 | Not Available | Negative | 2665323 - 2666003 | 24729.3 |
| hypothetical protein | HMPREF1534_02342 | Not Available | Positive | 2666220 - 2667119 | 34906.4 |
| hypothetical protein | HMPREF1534_02343 | Not Available | Positive | 2667233 - 2671888 | 172788.0 |
| hypothetical protein | HMPREF1534_02344 | Not Available | Positive | 2671894 - 2674236 | 88710.3 |
| hypothetical protein | HMPREF1534_02345 | Not Available | Positive | 2674497 - 2675408 | 33853.2 |
| hypothetical protein | HMPREF1534_02346 | Not Available | Negative | 2675811 - 2676035 | 8552.44 |
| hypothetical protein | HMPREF1534_02347 | Not Available | Positive | 2676166 - 2676990 | 30477.3 |
| hypothetical protein | HMPREF1534_02348 | Not Available | Positive | 2677010 - 2678269 | 48100.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


