Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01978 | Not Available | Negative | 2233453 - 2233800 | 13937.6 |
| hypothetical protein | HMPREF1534_01979 | Not Available | Negative | 2233908 - 2234150 | 8704.56 |
| hypothetical protein | HMPREF1534_01980 | Not Available | Negative | 2234134 - 2234418 | 11309.6 |
| hypothetical protein | HMPREF1534_01981 | Not Available | Negative | 2234431 - 2235099 | 25292.4 |
| hypothetical protein | HMPREF1534_01982 | Not Available | Negative | 2235131 - 2235553 | 16040.5 |
| hypothetical protein | HMPREF1534_01983 | Not Available | Negative | 2235556 - 2235825 | 10154.1 |
| hypothetical protein | HMPREF1534_01984 | Not Available | Negative | 2235822 - 2236052 | 8444.49 |
| hypothetical protein | HMPREF1534_01985 | Not Available | Negative | 2236042 - 2236752 | 27228.8 |
| hypothetical protein | HMPREF1534_01986 | Not Available | Negative | 2236761 - 2236988 | 8371.02 |
| hypothetical protein | HMPREF1534_01987 | Not Available | Negative | 2237000 - 2237584 | 22435.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


