Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01898 | Not Available | Positive | 2143644 - 2144018 | 14581.4 |
| hypothetical protein | HMPREF1534_01899 | Not Available | Positive | 2144032 - 2144487 | 17776.6 |
| hypothetical protein | HMPREF1534_01900 | Not Available | Negative | 2144570 - 2145724 | 43017.3 |
| hypothetical protein | HMPREF1534_01901 | Not Available | Positive | 2145872 - 2146258 | 14966.9 |
| hypothetical protein | HMPREF1534_01902 | Not Available | Positive | 2146280 - 2146534 | 9530.0 |
| tonb family domain-containing protein | HMPREF1534_01903 | Not Available | Positive | 2146969 - 2148384 | 53199.9 |
| tonb family domain-containing protein | HMPREF1534_01904 | Not Available | Positive | 2148421 - 2149332 | 35086.4 |
| hypothetical protein | HMPREF1534_01905 | Not Available | Positive | 2149457 - 2150122 | 25142.5 |
| hypothetical protein | HMPREF1534_01906 | Not Available | Positive | 2150476 - 2151681 | 45613.0 |
| hypothetical protein | HMPREF1534_01907 | Not Available | Positive | 2151688 - 2152143 | 16741.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


