Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01878 | Not Available | Positive | 2122180 - 2123466 | 49185.4 |
| hypothetical protein | HMPREF1534_01879 | Not Available | Negative | 2123493 - 2125250 | 65544.8 |
| hypothetical protein | HMPREF1534_01880 | Not Available | Negative | 2125386 - 2125817 | 16548.9 |
| hypothetical protein | HMPREF1534_01881 | Not Available | Positive | 2126475 - 2127728 | 49123.2 |
| hypothetical protein | HMPREF1534_01882 | Not Available | Positive | 2127735 - 2128889 | 44246.3 |
| hypothetical protein | HMPREF1534_01883 | Not Available | Positive | 2129130 - 2129318 | 7052.78 |
| hypothetical protein | HMPREF1534_01884 | Not Available | Positive | 2129264 - 2130031 | 29746.6 |
| hypothetical protein | HMPREF1534_01885 | Not Available | Negative | 2130102 - 2131025 | 35295.9 |
| hypothetical protein | HMPREF1534_01886 | Not Available | Negative | 2131072 - 2132244 | 44928.1 |
| hypothetical protein | HMPREF1534_01887 | Not Available | Negative | 2132267 - 2133118 | 32653.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


