Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01758 | Not Available | Positive | 1988482 - 1989435 | 36843.1 |
| hypothetical protein | HMPREF1534_01759 | Not Available | Positive | 1989645 - 1989875 | 9039.89 |
| hypothetical protein | HMPREF1534_01760 | Not Available | Negative | 1990235 - 1992658 | 91167.2 |
| hypothetical protein | HMPREF1534_01761 | Not Available | Positive | 1993511 - 1994011 | 19009.6 |
| hypothetical protein | HMPREF1534_01762 | Not Available | Positive | 1994488 - 1995840 | 50530.0 |
| hypothetical protein | HMPREF1534_01763 | Not Available | Positive | 1995849 - 1996556 | 26437.2 |
| hypothetical protein | HMPREF1534_01764 | Not Available | Positive | 1996569 - 1997825 | 48271.1 |
| hypothetical protein | HMPREF1534_01765 | Not Available | Positive | 1997822 - 1998634 | 31850.2 |
| hypothetical protein | HMPREF1534_01766 | Not Available | Positive | 1998612 - 1999781 | 44387.8 |
| hypothetical protein | HMPREF1534_01767 | Not Available | Positive | 1999778 - 2000896 | 42963.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


