Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01667 | Not Available | Positive | 1892881 - 1892994 | 4854.75 |
| hypothetical protein | HMPREF1534_01668 | Not Available | Negative | 1893143 - 1893610 | 17589.0 |
| hypothetical protein | HMPREF1534_01669 | Not Available | Negative | 1893552 - 1895045 | 56315.6 |
| hypothetical protein | HMPREF1534_01670 | Not Available | Positive | 1895421 - 1895807 | 14638.3 |
| hypothetical protein | HMPREF1534_01671 | Not Available | Positive | 1895833 - 1896375 | 20646.9 |
| hypothetical protein | HMPREF1534_01672 | Not Available | Negative | 1896473 - 1897273 | 31174.5 |
| hypothetical protein | HMPREF1534_01673 | Not Available | Negative | 1897279 - 1897962 | 26133.8 |
| hypothetical protein | HMPREF1534_01674 | Not Available | Positive | 1898078 - 1898170 | 3909.61 |
| hypothetical protein | HMPREF1534_01675 | Not Available | Positive | 1898246 - 1899379 | 43218.9 |
| hypothetical protein | HMPREF1534_01676 | Not Available | Positive | 1899393 - 1899848 | 17609.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


