Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01627 | Not Available | Positive | 1847923 - 1849395 | 56373.4 |
| hypothetical protein | HMPREF1534_01628 | Not Available | Positive | 1849401 - 1849892 | 18827.2 |
| hypothetical protein | HMPREF1534_01629 | Not Available | Positive | 1849873 - 1850628 | 28097.8 |
| hypothetical protein | HMPREF1534_01630 | Not Available | Positive | 1850649 - 1851350 | 27060.0 |
| hypothetical protein | HMPREF1534_01631 | Not Available | Positive | 1851405 - 1852082 | 23012.8 |
| hypothetical protein | HMPREF1534_01632 | Not Available | Positive | 1852109 - 1852939 | 31518.8 |
| hypothetical protein | HMPREF1534_01633 | Not Available | Positive | 1853008 - 1853244 | 9390.05 |
| hypothetical protein | HMPREF1534_01634 | Not Available | Positive | 1853283 - 1854671 | 51444.7 |
| hypothetical protein | HMPREF1534_01635 | Not Available | Positive | 1854699 - 1857134 | 92821.6 |
| hypothetical protein | HMPREF1534_01636 | Not Available | Positive | 1857147 - 1858727 | 58317.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


