Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01587 | Not Available | Positive | 1813381 - 1814196 | 31297.7 |
| hypothetical protein | HMPREF1534_01588 | Not Available | Positive | 1814555 - 1815574 | 38368.1 |
| hypothetical protein | HMPREF1534_01589 | Not Available | Positive | 1815660 - 1816106 | 16745.3 |
| hypothetical protein | HMPREF1534_01590 | Not Available | Positive | 1816262 - 1816849 | 22586.9 |
| hypothetical protein | HMPREF1534_01591 | Not Available | Positive | 1817596 - 1817949 | 13840.6 |
| hypothetical protein | HMPREF1534_01592 | Not Available | Positive | 1817989 - 1818327 | 12848.7 |
| hypothetical protein | HMPREF1534_01593 | Not Available | Positive | 1818337 - 1819545 | 45689.5 |
| hypothetical protein | HMPREF1534_01594 | Not Available | Negative | 1819610 - 1819981 | 14121.8 |
| hypothetical protein | HMPREF1534_01595 | Not Available | Negative | 1820014 - 1820226 | 8237.14 |
| hypothetical protein | HMPREF1534_01596 | Not Available | Negative | 1820234 - 1821013 | 30038.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


