Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01316 | Not Available | Positive | 1497957 - 1498952 | 37300.6 |
| hypothetical protein | HMPREF1534_01317 | Not Available | Positive | 1499153 - 1500022 | 33793.6 |
| hypothetical protein | HMPREF1534_01318 | Not Available | Positive | 1500028 - 1501125 | 41629.1 |
| hypothetical protein | HMPREF1534_01319 | Not Available | Positive | 1501145 - 1502143 | 37240.6 |
| hypothetical protein | HMPREF1534_01320 | Not Available | Positive | 1502156 - 1503178 | 38078.5 |
| hypothetical protein | HMPREF1534_01321 | Not Available | Positive | 1503185 - 1503892 | 27543.4 |
| hypothetical protein | HMPREF1534_01322 | Not Available | Positive | 1503931 - 1505763 | 67628.0 |
| hypothetical protein | HMPREF1534_01323 | Not Available | Positive | 1505782 - 1506564 | 29401.8 |
| hypothetical protein | HMPREF1534_01324 | Not Available | Positive | 1506571 - 1507278 | 26918.5 |
| hypothetical protein | HMPREF1534_01325 | Not Available | Positive | 1507400 - 1507672 | 10073.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


