Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03633 | Not Available | Positive | 4126361 - 4127281 | 35492.7 |
| hypothetical protein | HMPREF1534_03634 | Not Available | Negative | 4127350 - 4128276 | 35871.6 |
| hypothetical protein | HMPREF1534_03635 | Not Available | Negative | 4128284 - 4129045 | 29186.2 |
| hypothetical protein | HMPREF1534_03636 | Not Available | Negative | 4129075 - 4129995 | 35000.8 |
| hypothetical protein | HMPREF1534_03637 | Not Available | Negative | 4130000 - 4130371 | 13619.8 |
| hypothetical protein | HMPREF1534_03638 | Not Available | Negative | 4130599 - 4131102 | 18780.1 |
| hypothetical protein | HMPREF1534_03639 | Not Available | Positive | 4131580 - 4131891 | 12144.8 |
| hypothetical protein | HMPREF1534_03640 | Not Available | Positive | 4131938 - 4132258 | 12368.7 |
| hypothetical protein | HMPREF1534_03641 | Not Available | Negative | 4132783 - 4133175 | 14974.2 |
| hypothetical protein | HMPREF1534_03642 | Not Available | Negative | 4133215 - 4133775 | 22155.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


