Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_03533 | Not Available | Positive | 4024140 - 4024316 | 6375.41 |
| hypothetical protein | HMPREF1534_03534 | Not Available | Positive | 4024399 - 4025007 | 22965.1 |
| hypothetical protein | HMPREF1534_03535 | Not Available | Positive | 4025013 - 4026701 | 64409.8 |
| hypothetical protein | HMPREF1534_03536 | Not Available | Negative | 4026754 - 4027128 | 13712.2 |
| hypothetical protein | HMPREF1534_03537 | Not Available | Negative | 4027143 - 4027397 | 9949.81 |
| hypothetical protein | HMPREF1534_03538 | Not Available | Negative | 4027394 - 4027861 | 17754.8 |
| hypothetical protein | HMPREF1534_03539 | Not Available | Negative | 4028146 - 4028769 | 23455.5 |
| hypothetical protein | HMPREF1534_03540 | Not Available | Positive | 4029634 - 4030602 | 35248.6 |
| hypothetical protein | HMPREF1534_03541 | Not Available | Positive | 4030730 - 4032505 | 65844.5 |
| hypothetical protein | HMPREF1534_03542 | Not Available | Positive | 4032514 - 4034568 | 74125.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


