Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_02951 | Not Available | Negative | 3368734 - 3370176 | 54914.1 |
| hypothetical protein | HMPREF1534_02952 | Not Available | Positive | 3370539 - 3373016 | 92122.9 |
| hypothetical protein | HMPREF1534_02953 | Not Available | Positive | 3373028 - 3373450 | 15849.0 |
| hypothetical protein | HMPREF1534_02954 | Not Available | Positive | 3373464 - 3373874 | 15091.0 |
| hypothetical protein | HMPREF1534_02955 | Not Available | Positive | 3373900 - 3374892 | 36186.6 |
| hypothetical protein | HMPREF1534_02956 | Not Available | Positive | 3374889 - 3375407 | 20951.4 |
| hypothetical protein | HMPREF1534_02957 | Not Available | Positive | 3375503 - 3375796 | 11596.9 |
| hypothetical protein | HMPREF1534_02958 | Not Available | Positive | 3375811 - 3376209 | 15144.9 |
| hypothetical protein | HMPREF1534_02959 | Not Available | Positive | 3376254 - 3376652 | 15437.0 |
| hypothetical protein | HMPREF1534_02960 | Not Available | Positive | 3376643 - 3377107 | 17646.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


