Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_02931 | Not Available | Negative | 3348341 - 3349378 | 39334.3 |
| hypothetical protein | HMPREF1534_02932 | Not Available | Negative | 3349520 - 3349885 | 13788.4 |
| hypothetical protein | HMPREF1534_02933 | Not Available | Negative | 3350036 - 3350233 | 7433.23 |
| hypothetical protein | HMPREF1534_02934 | Not Available | Negative | 3350709 - 3351263 | 21698.7 |
| hypothetical protein | HMPREF1534_02935 | Not Available | Negative | 3351266 - 3351628 | 13901.5 |
| hypothetical protein | HMPREF1534_02936 | Not Available | Negative | 3351944 - 3352852 | 35988.2 |
| hypothetical protein | HMPREF1534_02937 | Not Available | Negative | 3352857 - 3353816 | 37066.9 |
| hypothetical protein | HMPREF1534_02938 | Not Available | Negative | 3353856 - 3355481 | 62051.2 |
| hypothetical protein | HMPREF1534_02939 | Not Available | Negative | 3355533 - 3355748 | 8315.93 |
| hypothetical protein | HMPREF1534_02940 | Not Available | Negative | 3356279 - 3357055 | 31066.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


