Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_02921 | Not Available | Negative | 3336645 - 3336920 | 10129.2 |
| hypothetical protein | HMPREF1534_02922 | Not Available | Negative | 3336974 - 3338806 | 69562.3 |
| hypothetical protein | HMPREF1534_02923 | Not Available | Positive | 3338902 - 3339249 | 13566.4 |
| hypothetical protein | HMPREF1534_02924 | Not Available | Negative | 3339436 - 3340755 | 49571.6 |
| hypothetical protein | HMPREF1534_02925 | Not Available | Negative | 3340736 - 3343057 | 87769.8 |
| hypothetical protein | HMPREF1534_02926 | Not Available | Negative | 3343475 - 3343999 | 20205.6 |
| hypothetical protein | HMPREF1534_02927 | Not Available | Negative | 3344239 - 3345378 | 42307.4 |
| hypothetical protein | HMPREF1534_02928 | Not Available | Negative | 3345383 - 3346003 | 24386.7 |
| hypothetical protein | HMPREF1534_02929 | Not Available | Negative | 3346497 - 3347477 | 38370.4 |
| hypothetical protein | HMPREF1534_02930 | Not Available | Negative | 3347797 - 3348348 | 20905.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


