Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_02721 | Not Available | Positive | 3096382 - 3096852 | 17994.1 |
| hypothetical protein | HMPREF1534_02722 | Not Available | Positive | 3096864 - 3097382 | 20365.9 |
| hypothetical protein | HMPREF1534_02723 | Not Available | Positive | 3097474 - 3098166 | 27001.0 |
| hypothetical protein | HMPREF1534_02724 | Not Available | Positive | 3098173 - 3098400 | 9092.74 |
| hypothetical protein | HMPREF1534_02725 | Not Available | Positive | 3098425 - 3099288 | 31045.3 |
| hypothetical protein | HMPREF1534_02726 | Not Available | Positive | 3099288 - 3100040 | 28937.1 |
| hypothetical protein | HMPREF1534_02727 | Not Available | Positive | 3100095 - 3100763 | 24711.1 |
| hypothetical protein | HMPREF1534_02728 | Not Available | Positive | 3100820 - 3101251 | 17081.6 |
| hypothetical protein | HMPREF1534_02729 | Not Available | Positive | 3101628 - 3102200 | 22270.0 |
| hypothetical protein | HMPREF1534_02730 | Not Available | Negative | 3103189 - 3103320 | 5112.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


