Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_02521 | Not Available | Negative | 2890868 - 2891545 | 24860.0 |
| hypothetical protein | HMPREF1534_02522 | Not Available | Negative | 2891580 - 2892425 | 30906.1 |
| hypothetical protein | HMPREF1534_02523 | Not Available | Positive | 2892795 - 2893319 | 21310.8 |
| hypothetical protein | HMPREF1534_02524 | Not Available | Negative | 2893340 - 2895649 | 88354.3 |
| hypothetical protein | HMPREF1534_02525 | Not Available | Negative | 2895667 - 2897931 | 85406.3 |
| hypothetical protein | HMPREF1534_02526 | Not Available | Negative | 2897972 - 2900197 | 83862.0 |
| hypothetical protein | HMPREF1534_02527 | Not Available | Positive | 2900408 - 2901094 | 25432.5 |
| hypothetical protein | HMPREF1534_02528 | Not Available | Negative | 2901201 - 2901821 | 22462.4 |
| hypothetical protein | HMPREF1534_02529 | Not Available | Negative | 2901818 - 2902096 | 10155.0 |
| hypothetical protein | HMPREF1534_02530 | Not Available | Positive | 2902604 - 2903494 | 34242.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


