Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_02269 | Not Available | Negative | 2574273 - 2574644 | 13000.7 |
| hypothetical protein | HMPREF1534_02270 | Not Available | Negative | 2574767 - 2576857 | 81228.8 |
| hypothetical protein | HMPREF1534_02271 | Not Available | Positive | 2577013 - 2577453 | 17080.2 |
| hypothetical protein | HMPREF1534_02272 | Not Available | Negative | 2577821 - 2578756 | 36328.6 |
| hypothetical protein | HMPREF1534_02273 | Not Available | Negative | 2578785 - 2579168 | 14685.6 |
| hypothetical protein | HMPREF1534_02274 | Not Available | Negative | 2579279 - 2580313 | 38669.8 |
| hypothetical protein | HMPREF1534_02275 | Not Available | Positive | 2580458 - 2581390 | 34729.3 |
| hypothetical protein | HMPREF1534_02276 | Not Available | Positive | 2581466 - 2583088 | 61281.8 |
| hypothetical protein | HMPREF1534_02277 | Not Available | Negative | 2583309 - 2584622 | 48791.2 |
| hypothetical protein | HMPREF1534_02278 | Not Available | Negative | 2584634 - 2586181 | 56666.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


