Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_02088 | Not Available | Negative | 2334266 - 2335066 | 31159.6 |
| hypothetical protein | HMPREF1534_02089 | Not Available | Negative | 2335066 - 2335869 | 30219.5 |
| hypothetical protein | HMPREF1534_02090 | Not Available | Negative | 2335862 - 2336926 | 40932.6 |
| hypothetical protein | HMPREF1534_02091 | Not Available | Negative | 2336932 - 2338146 | 46166.0 |
| hypothetical protein | HMPREF1534_02092 | Not Available | Negative | 2338157 - 2339197 | 39489.1 |
| hypothetical protein | HMPREF1534_02093 | Not Available | Negative | 2339199 - 2340272 | 41247.6 |
| hypothetical protein | HMPREF1534_02094 | Not Available | Negative | 2340260 - 2340940 | 27058.7 |
| hypothetical protein | HMPREF1534_02095 | Not Available | Negative | 2340944 - 2341924 | 37765.6 |
| hypothetical protein | HMPREF1534_02096 | Not Available | Negative | 2342171 - 2343319 | 43333.8 |
| hypothetical protein | HMPREF1534_02097 | Not Available | Negative | 2343438 - 2344553 | 41899.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


