Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_02068 | Not Available | Negative | 2321290 - 2322189 | 35557.7 |
| hypothetical protein | HMPREF1534_02069 | Not Available | Negative | 2322202 - 2323314 | 41902.3 |
| hypothetical protein | HMPREF1534_02070 | Not Available | Negative | 2323317 - 2323799 | 17974.6 |
| hypothetical protein | HMPREF1534_02071 | Not Available | Negative | 2323811 - 2324287 | 19406.4 |
| hypothetical protein | HMPREF1534_02072 | Not Available | Negative | 2324300 - 2324932 | 24220.8 |
| hypothetical protein | HMPREF1534_02073 | Not Available | Negative | 2324938 - 2325954 | 38734.5 |
| hypothetical protein | HMPREF1534_02074 | Not Available | Negative | 2325966 - 2326079 | 4578.71 |
| hypothetical protein | HMPREF1534_02075 | Not Available | Negative | 2326241 - 2326393 | 5693.15 |
| hypothetical protein | HMPREF1534_02076 | Not Available | Positive | 2326518 - 2327525 | 37990.1 |
| hypothetical protein | HMPREF1534_02077 | Not Available | Positive | 2327583 - 2329505 | 71566.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


