Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_02058 | Not Available | Positive | 2309220 - 2310758 | 55605.6 |
| hypothetical protein | HMPREF1534_02059 | Not Available | Positive | 2310782 - 2311729 | 35791.5 |
| hypothetical protein | HMPREF1534_02060 | Not Available | Positive | 2311816 - 2312757 | 36604.4 |
| hypothetical protein | HMPREF1534_02061 | Not Available | Negative | 2312858 - 2314054 | 41989.1 |
| hypothetical protein | HMPREF1534_02062 | Not Available | Negative | 2314097 - 2314852 | 28899.6 |
| hypothetical protein | HMPREF1534_02063 | Not Available | Negative | 2314879 - 2315790 | 35122.0 |
| hypothetical protein | HMPREF1534_02064 | Not Available | Negative | 2315771 - 2317699 | 73300.8 |
| hypothetical protein | HMPREF1534_02065 | Not Available | Negative | 2317699 - 2318964 | 46220.4 |
| hypothetical protein | HMPREF1534_02066 | Not Available | Negative | 2319071 - 2320078 | 37563.8 |
| hypothetical protein | HMPREF1534_02067 | Not Available | Negative | 2320084 - 2321277 | 45059.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


