Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_02008 | Not Available | Negative | 2254725 - 2256026 | 49318.7 |
| hypothetical protein | HMPREF1534_02009 | Not Available | Negative | 2256035 - 2257390 | 50723.7 |
| hypothetical protein | HMPREF1534_02010 | Not Available | Negative | 2257421 - 2258884 | 56098.5 |
| hypothetical protein | HMPREF1534_02011 | Not Available | Negative | 2259320 - 2260600 | 48720.2 |
| hypothetical protein | HMPREF1534_02012 | Not Available | Negative | 2260605 - 2261879 | 47372.6 |
| hypothetical protein | HMPREF1534_02013 | Not Available | Negative | 2262065 - 2262730 | 24678.2 |
| hypothetical protein | HMPREF1534_02014 | Not Available | Negative | 2262904 - 2264217 | 50169.4 |
| hypothetical protein | HMPREF1534_02015 | Not Available | Negative | 2264233 - 2265537 | 49333.2 |
| hypothetical protein | HMPREF1534_02016 | Not Available | Negative | 2265676 - 2266923 | 46569.1 |
| hypothetical protein | HMPREF1534_02017 | Not Available | Negative | 2267089 - 2267982 | 34898.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


