Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01727 | Not Available | Positive | 1955419 - 1955544 | 4695.27 |
| hypothetical protein | HMPREF1534_01728 | Not Available | Positive | 1955556 - 1956422 | 32473.7 |
| hypothetical protein | HMPREF1534_01729 | Not Available | Positive | 1956918 - 1957484 | 21104.5 |
| hypothetical protein | HMPREF1534_01730 | Not Available | Positive | 1957489 - 1957617 | 4702.75 |
| hypothetical protein | HMPREF1534_01731 | Not Available | Negative | 1957721 - 1958338 | 23608.1 |
| hypothetical protein | HMPREF1534_01732 | Not Available | Negative | 1958354 - 1959796 | 54914.1 |
| hypothetical protein | HMPREF1534_01733 | Not Available | Negative | 1959884 - 1962031 | 83903.4 |
| hypothetical protein | HMPREF1534_01734 | Not Available | Negative | 1962145 - 1962960 | 29468.6 |
| hypothetical protein | HMPREF1534_01735 | Not Available | Negative | 1962992 - 1964059 | 38998.1 |
| hypothetical protein | HMPREF1534_01737 | Not Available | Positive | 1966201 - 1966587 | 14847.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


