Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01687 | Not Available | Positive | 1906980 - 1907624 | 25162.2 |
| hypothetical protein | HMPREF1534_01688 | Not Available | Positive | 1907649 - 1907990 | 13260.6 |
| hypothetical protein | HMPREF1534_01689 | Not Available | Positive | 1908338 - 1908571 | 8533.28 |
| hypothetical protein | HMPREF1534_01690 | Not Available | Positive | 1908574 - 1909665 | 40357.7 |
| hypothetical protein | HMPREF1534_01691 | Not Available | Positive | 1909668 - 1910405 | 28850.1 |
| hypothetical protein | HMPREF1534_01692 | Not Available | Negative | 1910469 - 1911659 | 45950.6 |
| hypothetical protein | HMPREF1534_01693 | Not Available | Negative | 1911665 - 1913278 | 62204.5 |
| hypothetical protein | HMPREF1534_01694 | Not Available | Negative | 1913294 - 1916353 | 116030.0 |
| hypothetical protein | HMPREF1534_01695 | Not Available | Negative | 1916392 - 1918293 | 72285.2 |
| hypothetical protein | HMPREF1534_01696 | Not Available | Negative | 1918296 - 1918976 | 26266.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


