Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01637 | Not Available | Positive | 1858879 - 1860165 | 49043.0 |
| hypothetical protein | HMPREF1534_01638 | Not Available | Positive | 1860360 - 1860974 | 22626.9 |
| hypothetical protein | HMPREF1534_01639 | Not Available | Positive | 1860974 - 1862485 | 57520.8 |
| hypothetical protein | HMPREF1534_01640 | Not Available | Negative | 1862664 - 1863065 | 14982.2 |
| hypothetical protein | HMPREF1534_01641 | Not Available | Negative | 1863152 - 1863259 | 4172.26 |
| hypothetical protein | HMPREF1534_01642 | Not Available | Negative | 1863278 - 1864093 | 30159.6 |
| hypothetical protein | HMPREF1534_01643 | Not Available | Negative | 1864104 - 1869311 | 199309.0 |
| hypothetical protein | HMPREF1534_01644 | Not Available | Negative | 1869314 - 1870381 | 41102.3 |
| hypothetical protein | HMPREF1534_01645 | Not Available | Negative | 1870385 - 1871461 | 41910.6 |
| hypothetical protein | HMPREF1534_01646 | Not Available | Negative | 1871569 - 1872969 | 52794.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


