Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01607 | Not Available | Positive | 1830959 - 1831537 | 21894.3 |
| hypothetical protein | HMPREF1534_01608 | Not Available | Positive | 1831503 - 1832234 | 27557.4 |
| hypothetical protein | HMPREF1534_01609 | Not Available | Positive | 1832231 - 1832446 | 8468.05 |
| hypothetical protein | HMPREF1534_01610 | Not Available | Positive | 1832443 - 1832931 | 19126.7 |
| hypothetical protein | HMPREF1534_01611 | Not Available | Positive | 1832928 - 1833146 | 8505.34 |
| hypothetical protein | HMPREF1534_01612 | Not Available | Positive | 1833158 - 1834363 | 45757.7 |
| hypothetical protein | HMPREF1534_01613 | Not Available | Negative | 1834482 - 1835933 | 55049.3 |
| hypothetical protein | HMPREF1534_01614 | Not Available | Negative | 1835935 - 1836564 | 25230.4 |
| hypothetical protein | HMPREF1534_01615 | Not Available | Negative | 1836540 - 1837412 | 33623.5 |
| hypothetical protein | HMPREF1534_01616 | Not Available | Negative | 1837412 - 1838527 | 42859.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


