Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01547 | Not Available | Positive | 1762845 - 1763006 | 6059.67 |
| hypothetical protein | HMPREF1534_01548 | Not Available | Positive | 1763070 - 1764359 | 48396.6 |
| hypothetical protein | HMPREF1534_01549 | Not Available | Positive | 1764551 - 1765771 | 46788.7 |
| hypothetical protein | HMPREF1534_01550 | Not Available | Positive | 1765764 - 1766537 | 29825.8 |
| hypothetical protein | HMPREF1534_01551 | Not Available | Negative | 1766594 - 1768261 | 64235.5 |
| hypothetical protein | HMPREF1534_01552 | Not Available | Negative | 1768272 - 1768634 | 14160.0 |
| hypothetical protein | HMPREF1534_01553 | Not Available | Negative | 1768909 - 1772343 | 129220.0 |
| hypothetical protein | HMPREF1534_01554 | Not Available | Negative | 1772602 - 1773804 | 44711.1 |
| hypothetical protein | HMPREF1534_01555 | Not Available | Negative | 1773801 - 1774445 | 24507.5 |
| hypothetical protein | HMPREF1534_01556 | Not Available | Negative | 1774442 - 1775977 | 56550.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


