Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola massiliensis |
| Strain | B84634 = Timone 84634 = DSM 17679 = JCM |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1304608 bp
Thymine Count
1311189 bp
Guanine Count
968725 bp
Cytosine Count
980062 bp
Genome Length
4564584 bp
Protein-coding Genes
3935 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1534_01446 | Not Available | Negative | 1649556 - 1651595 | 77757.5 |
| hypothetical protein | HMPREF1534_01447 | Not Available | Positive | 1651748 - 1652869 | 41578.5 |
| alpha-glucan phosphorylase | HMPREF1534_01448 | Not Available | Negative | 1653221 - 1655785 | 98182.0 |
| hypothetical protein | HMPREF1534_01449 | Not Available | Negative | 1655813 - 1657486 | 63616.9 |
| hypothetical protein | HMPREF1534_01450 | Not Available | Negative | 1657741 - 1658205 | 15449.2 |
| hypothetical protein | HMPREF1534_01451 | Not Available | Negative | 1658235 - 1660040 | 67187.2 |
| hypothetical protein | HMPREF1534_01452 | Not Available | Negative | 1660037 - 1660642 | 23493.8 |
| hypothetical protein | HMPREF1534_01453 | Not Available | Negative | 1660657 - 1661979 | 48197.8 |
| hypothetical protein | HMPREF1534_01454 | Not Available | Negative | 1662090 - 1663844 | 65791.2 |
| hypothetical protein | HMPREF1534_01455 | Not Available | Negative | 1663863 - 1664699 | 32606.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


