Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | Cherry 2E-2-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086899 bp
Thymine Count
1089154 bp
Guanine Count
1625328 bp
Cytosine Count
1623912 bp
Genome Length
5425293 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | H009_02008 | Not Available | Positive | 439301 - 440062 | 27427.7 |
| arac family transcriptional regulator | H009_02013 | Not Available | Negative | 440032 - 440955 | 34236.4 |
| 4-hydroxybenzoate 3-monooxygenase | H009_02018 | Not Available | Positive | 441073 - 442245 | 43853.0 |
| lysr family transcriptional regulator | H009_02023 | Not Available | Negative | 442368 - 443303 | 33501.9 |
| beta-ketoadipate enol-lactone hydrolase | H009_02028 | Not Available | Positive | 443398 - 444195 | 28574.2 |
| carboxymuconolactone decarboxylase | H009_02033 | Not Available | Positive | 444199 - 444648 | 16223.0 |
| protocatechuate 3,4-dioxygenase subunit beta | H009_02038 | Not Available | Positive | 444645 - 445385 | 27783.4 |
| protocatechuate 3,4-dioxygenase subunit alpha | H009_02043 | Not Available | Positive | 445388 - 446008 | 22890.0 |
| 3-carboxy-cis,cis-muconate cycloisomerase | H009_02048 | Not Available | Positive | 446077 - 447138 | 37433.8 |
| amino acid abc transporter permease | H009_02053 | Not Available | Positive | 447611 - 448279 | 24115.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


