Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | Cherry 2E-2-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086899 bp
Thymine Count
1089154 bp
Guanine Count
1625328 bp
Cytosine Count
1623912 bp
Genome Length
5425293 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine abc transport system permease poth | H009_00405 | Not Available | Positive | 76920 - 77828 | 33993.4 |
| spermidine/putrescine transport system permease | H009_00410 | Not Available | Positive | 77833 - 78645 | 29527.0 |
| abc transporter, membrane spanning protein | H009_00415 | Not Available | Negative | 78954 - 80618 | 59968.4 |
| two component sensor kinase | H009_00420 | Not Available | Negative | 80697 - 84473 | 134188.0 |
| Trna-his | Not Available | Not Available | Positive | 84790 - 84866 | Not Available |
| dihydrodipicolinate synthetase | H009_00425 | Not Available | Negative | 85039 - 85965 | 33236.5 |
| trap dicarboxylate transporter, dctm subunit | H009_00430 | Not Available | Negative | 86097 - 87398 | 45680.4 |
| trap-t family transporter small inner membrane subunit | H009_00435 | Not Available | Negative | 87402 - 87935 | 18520.2 |
| trap dicarboxylate transporter- dctp subunit | H009_00440 | Not Available | Negative | 88014 - 88994 | 35158.2 |
| aminotransferase, class iv | H009_00445 | Not Available | Negative | 89329 - 90183 | 30997.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


