Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | Cherry 2E-2-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086899 bp
Thymine Count
1089154 bp
Guanine Count
1625328 bp
Cytosine Count
1623912 bp
Genome Length
5425293 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrin-iii c-methyltransferase | H009_04309 | Not Available | Positive | 934962 - 935750 | 27296.2 |
| cobyrinic acid a,c-diamide synthase | H009_04314 | Not Available | Positive | 935747 - 937063 | 45941.0 |
| cytochrome-c peroxidase | H009_04319 | Not Available | Positive | 937286 - 938530 | 44602.6 |
| 3-isopropylmalate dehydrogenase | H009_04324 | Not Available | Negative | 938511 - 939623 | 39608.9 |
| isopropylmalate isomerase small subunit | H009_04329 | Not Available | Negative | 939845 - 940450 | 21946.1 |
| hypothetical protein | H009_04334 | Not Available | Negative | 940617 - 940847 | 8090.21 |
| citrate lyase subunit beta | H009_04339 | Not Available | Positive | 940958 - 941869 | 33094.0 |
| hypothetical protein | H009_04344 | Not Available | Positive | 941866 - 942072 | 7503.94 |
| hypothetical protein | H009_04349 | Not Available | Negative | 942092 - 942532 | 16814.5 |
| 50s ribosomal protein l21 | H009_04354 | Not Available | Positive | 942863 - 943177 | 11366.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


