Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | Cherry 2E-2-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086899 bp
Thymine Count
1089154 bp
Guanine Count
1625328 bp
Cytosine Count
1623912 bp
Genome Length
5425293 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine abc transporter, permease protein | H009_03599 | Not Available | Negative | 769870 - 770658 | 28585.1 |
| abc-type spermidine/putrescine transporter, permease i | H009_03604 | Not Available | Negative | 770667 - 771539 | 31220.1 |
| abc-type spermidine/putrescine transporter, atpase component | H009_03609 | Not Available | Negative | 771539 - 772594 | 38132.3 |
| hypothetical protein | H009_03614 | Not Available | Negative | 772615 - 773688 | 38388.5 |
| microsomal dipeptidase | H009_03619 | Not Available | Negative | 773719 - 774720 | 36812.9 |
| 2-hydroxychromene-2-carboxylate isomerase | H009_03624 | Not Available | Negative | 774717 - 775361 | 23605.2 |
| fad dependent oxidoreductase | H009_03629 | Not Available | Negative | 775354 - 776850 | 53826.2 |
| nitrilotriacetate monooxygenase component a | H009_03634 | Not Available | Positive | 777229 - 778554 | 48509.1 |
| putative aliphatic sulfonates-binding protein | H009_03639 | Not Available | Positive | 778708 - 779703 | 36085.1 |
| putative aliphatic sulfonates transport permease ssuc | H009_03644 | Not Available | Positive | 779700 - 780569 | 32263.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


