Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | Cherry 2E-2-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086899 bp
Thymine Count
1089154 bp
Guanine Count
1625328 bp
Cytosine Count
1623912 bp
Genome Length
5425293 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | H009_01954 | Not Available | Positive | 429073 - 429798 | 26754.1 |
| inosose isomerase | H009_01963 | Not Available | Negative | 430098 - 430883 | 27851.4 |
| inositol 2-dehydrogenase | H009_01968 | Not Available | Negative | 430892 - 431902 | 36265.3 |
| myo-inositol catabolism protein | H009_01973 | Not Available | Negative | 431913 - 432809 | 34480.0 |
| abc transporter substrate binding protein | H009_01978 | Not Available | Negative | 432857 - 433780 | 32277.6 |
| putative rhizopine uptake abc transporter periplasmic solute-binding protein | H009_01983 | Not Available | Negative | 433903 - 434844 | 32992.4 |
| transcription regulator, laci family protein | H009_01988 | Not Available | Negative | 435123 - 436151 | 38099.3 |
| beta-ketoadipyl coa thiolase | H009_01993 | Not Available | Negative | 436549 - 437754 | 41610.0 |
| 3-oxoadipate coa-transferase subunit b | H009_01998 | Not Available | Negative | 437765 - 438460 | 24777.7 |
| 3-oxoadipate coa-transferase subunit a | H009_02003 | Not Available | Negative | 438457 - 439164 | 24919.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


