Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | Cherry 2E-2-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1086899 bp
Thymine Count
1089154 bp
Guanine Count
1625328 bp
Cytosine Count
1623912 bp
Genome Length
5425293 bp
Protein-coding Genes
5033 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | H009_01459 | Not Available | Negative | 316507 - 317214 | 25810.9 |
| short-chain dehydrogenase | H009_01464 | Not Available | Negative | 317211 - 318011 | 28181.9 |
| d-isomer specific 2-hydroxyacid dehydrogenase | H009_01469 | Not Available | Negative | 318181 - 319116 | 33490.4 |
| short-chain dehydrogenase/reductase | H009_01474 | Not Available | Negative | 319126 - 319881 | 26004.2 |
| nucleoside-diphosphate-sugar epimerase | H009_01479 | Not Available | Negative | 319878 - 320864 | 35161.5 |
| hypothetical protein | H009_01484 | Not Available | Negative | 320907 - 322418 | 52442.7 |
| hypothetical protein | H009_01489 | Not Available | Negative | 322415 - 322867 | 15678.1 |
| s-adenosylmethionine: 2-demethylmenaquinone methyltransferase protein | H009_01494 | Not Available | Negative | 322940 - 323608 | 23788.9 |
| hypothetical protein | H009_01499 | Not Available | Negative | 323710 - 324663 | 33304.1 |
| transcriptional regulator (nitrogen assimilation control protein) | H009_01504 | Not Available | Negative | 324758 - 325645 | 32336.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


